So I tried using mods on two games on steam, Chrono Trigger and FF6, but they didn’t seem to work and when I went to check in the WeMod app it said they were off, even though I pressed the correct numbers. So is there something that I’m doing wrong?
Hello and welcome to WeMod. 
Sorry to hear of this issue.
Here’s a checklist to go through:
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Are you pressing the Play button first in the top-right of the trainer? The trainer is not injected into the game unless this is done.
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If you are doing the above, then instead try launching the game first. Wait on the main menu for 5 minutes. Then alt+tab to WeMod and press Play.
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Is WeMod added as an exception in your antivirus program or has a WeMod file been quarantined by your antivirus?
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Are the games actually purchased from Steam or are they cracked/pirated? They can’t be both Steam games and cracked games, there’s no such thing.
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Do you get any error messages at all?
Thank you. 